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survival (version 2.35-2)

Survival analysis, including penalised likelihood.

Description

survival analysis: descriptive statistics, two-sample tests, parametric accelerated failure models, Cox model. Delayed entry (truncation) allowed for all models; interval censoring for parametric models. Case-cohort designs.

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Version

Install

install.packages('survival')

Monthly Downloads

173,894

Version

2.35-2

License

GPL-2

Maintainer

Thomas Lumley

Last Published

March 20th, 2009

Functions in survival (2.35-2)

print.summary.coxph

Print method for summary.coxph objects
clogit

Conditional logistic regression
aareg

Aalen's additive regression model for censored data
mgus

Monoclonal gammapothy data
predict.survreg

Predicted Values for a `survreg' Object
ridge

Ridge regression
survfit.object

Survival Curve Object
heart

Stanford Heart Transplant data
attrassign

Create new-style "assign" attribute
cch

Fits proportional hazards regression model to case-cohort data
survival-internal

Internal survival functions
ratetables

Census Data Sets for the Expected Survival and Person Years Functions
pbc

Mayo Clinic Primary Biliary Cirrhosis Data
lung

NCCTG Lung Cancer Data
plot.cox.zph

Graphical Test of Proportional Hazards
print.survfit

Print a Short Summary of a Survival Curve
pyears

Person Years
nwtco

Data from the National Wilm's Tumor Study
coxph

Fit Proportional Hazards Regression Model
stanford2

More Stanford Heart Transplant data
untangle.specials

Help Process the `specials' Argument of the `terms' Function.
survregDtest

Verify a survreg distribution
summary.survfit

Summary of a Survival Curve
survfit.coxph

Compute a Survival Curve from a Cox model
is.ratetable

Verify that an object is of class ratetable.
survSplit

Split a survival data set at specified times
survexp.fit

Compute Expected Survival
dsurvreg

Distributions available in survreg.
coxph.control

Ancillary arguments for controling coxph fits
frailty

Random effects terms
bladder

Bladder Cancer Recurrences
survobrien

O'Brien's Test for Association of a Single Variable with Survival
survreg.control

Package options for survreg and coxph
cox.zph

Test the Proportional Hazards Assumption of a Cox Regression
coxph.object

Proportional Hazards Regression Object
ratetable

Ratetable reference in formula
summary.coxph

Summary method for Cox models
lines.survfit

Add Lines or Points to a Survival Plot
predict.coxph

Predictions for a Cox model
survexp

Compute Expected Survival
survfit

Compute a Survival Curve for Censored Data
survreg.distributions

Parametric Survival Distributions
survreg

Regression for a Parametric Survival Model
Surv

Create a Survival Object
survConcordance

Compute a concordance measure.
aml

Acute Myelogenous Leukemia survival data
anova.coxph

Analysis of Deviance for a Cox model.
rats

Rat data from Gail et al.
cluster

Identify clusters.
coxph.detail

Details of a Cox Model Fit
print.summary.survfit

Print Survfit Summary
plot.aareg

Plot an aareg object.
strata

Identify Stratification Variables
kidney

Kidney catheter data
plot.survfit

Plot Method for 'survfit'
tcut

Factors for person-year calculations
residuals.coxph

Calculate Residuals for a `coxph' Fit
summary.aareg

Summarize an aareg fit
residuals.survreg

Compute Residuals for `survreg' Objects
survreg.object

Parametric Survival Model Object
colon

Chemotherapy for Stage B/C colon cancer
pbcseq

Mayo Clinic Primary Biliary Cirrhosis, sequential data
print.aareg

Print an aareg object
pspline

Smoothing splines using a pspline basis
cgd

Chronic Granulotomous Disease data
tobin

Tobin's Tobit data
survdiff

Test Survival Curve Differences
veteran

Veterans' Administration Lung Cancer study
basehaz

Compute the baseline survival curve for a Cox model
ovarian

Ovarian Cancer Survival Data