Learn R Programming
⚠️There's a newer version (3.8-3) of this package.Take me there.

survival (version 2.35-3)

Survival analysis, including penalised likelihood.

Description

survival analysis: descriptive statistics, two-sample tests, parametric accelerated failure models, Cox model. Delayed entry (truncation) allowed for all models; interval censoring for parametric models. Case-cohort designs.

Copy Link

Version

Install

install.packages('survival')

Monthly Downloads

98,782

Version

2.35-3

License

GPL-2

Maintainer

Thomas Lumley

Last Published

March 20th, 2009

Functions in survival (2.35-3)

aml

Acute Myelogenous Leukemia survival data
colon

Chemotherapy for Stage B/C colon cancer
anova.coxph

Analysis of Deviance for a Cox model.
frailty

Random effects terms
heart

Stanford Heart Transplant data
survfit.object

Survival Curve Object
dsurvreg

Distributions available in survreg.
survSplit

Split a survival data set at specified times
residuals.survreg

Compute Residuals for `survreg' Objects
basehaz

Compute the baseline survival curve for a Cox model
survexp.fit

Compute Expected Survival
cch

Fits proportional hazards regression model to case-cohort data
kidney

Kidney catheter data
plot.aareg

Plot an aareg object.
coxph

Fit Proportional Hazards Regression Model
pbc

Mayo Clinic Primary Biliary Cirrhosis Data
summary.coxph

Summary method for Cox models
ridge

Ridge regression
predict.coxph

Predictions for a Cox model
print.summary.coxph

Print method for summary.coxph objects
summary.aareg

Summarize an aareg fit
stanford2

More Stanford Heart Transplant data
survfit

Compute a Survival Curve for Censored Data
survfit.coxph

Compute a Survival Curve from a Cox model
pbcseq

Mayo Clinic Primary Biliary Cirrhosis, sequential data
cluster

Identify clusters.
coxph.control

Ancillary arguments for controling coxph fits
survdiff

Test Survival Curve Differences
plot.survfit

Plot Method for 'survfit'
nwtco

Data from the National Wilm's Tumor Study
attrassign

Create new-style "assign" attribute
mgus

Monoclonal gammapothy data
survreg.object

Parametric Survival Model Object
pyears

Person Years
survival-internal

Internal survival functions
print.summary.survfit

Print Survfit Summary
print.aareg

Print an aareg object
lines.survfit

Add Lines or Points to a Survival Plot
ratetables

Census Data Sets for the Expected Survival and Person Years Functions
veteran

Veterans' Administration Lung Cancer study
coxph.object

Proportional Hazards Regression Object
tobin

Tobin's Tobit data
survConcordance

Compute a concordance measure.
bladder

Bladder Cancer Recurrences
survobrien

O'Brien's Test for Association of a Single Variable with Survival
pspline

Smoothing splines using a pspline basis
Surv

Create a Survival Object
strata

Identify Stratification Variables
lung

NCCTG Lung Cancer Data
ovarian

Ovarian Cancer Survival Data
is.ratetable

Verify that an object is of class ratetable.
survreg.distributions

Parametric Survival Distributions
survregDtest

Verify a survreg distribution
plot.cox.zph

Graphical Test of Proportional Hazards
survreg

Regression for a Parametric Survival Model
print.survfit

Print a Short Summary of a Survival Curve
ratetable

Ratetable reference in formula
survexp

Compute Expected Survival
predict.survreg

Predicted Values for a `survreg' Object
cox.zph

Test the Proportional Hazards Assumption of a Cox Regression
cgd

Chronic Granulotomous Disease data
tcut

Factors for person-year calculations
aareg

Aalen's additive regression model for censored data
untangle.specials

Help Process the `specials' Argument of the `terms' Function.
residuals.coxph

Calculate Residuals for a `coxph' Fit
clogit

Conditional logistic regression
coxph.detail

Details of a Cox Model Fit
rats

Rat data from Gail et al.
summary.survfit

Summary of a Survival Curve
survreg.control

Package options for survreg and coxph