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survival (version 2.35-4)

Survival analysis, including penalised likelihood.

Description

survival analysis: descriptive statistics, two-sample tests, parametric accelerated failure models, Cox model. Delayed entry (truncation) allowed for all models; interval censoring for parametric models. Case-cohort designs.

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Version

Install

install.packages('survival')

Monthly Downloads

98,782

Version

2.35-4

License

GPL-2

Maintainer

Thomas Lumley

Last Published

April 1st, 2009

Functions in survival (2.35-4)

survfit.coxph

Compute a Survival Curve from a Cox model
plot.survfit

Plot Method for 'survfit'
survreg.distributions

Parametric Survival Distributions
heart

Stanford Heart Transplant data
cluster

Identify clusters.
anova.coxph

Analysis of Deviance for a Cox model.
Surv

Create a Survival Object
ovarian

Ovarian Cancer Survival Data
coxph.object

Proportional Hazards Regression Object
plot.cox.zph

Graphical Test of Proportional Hazards
coxph.control

Ancillary arguments for controling coxph fits
is.ratetable

Verify that an object is of class ratetable.
colon

Chemotherapy for Stage B/C colon cancer
summary.coxph

Summary method for Cox models
survdiff

Test Survival Curve Differences
coxph.detail

Details of a Cox Model Fit
bladder

Bladder Cancer Recurrences
cgd

Chronic Granulotomous Disease data
ratetables

Census Data Sets for the Expected Survival and Person Years Functions
predict.coxph

Predictions for a Cox model
pspline

Smoothing splines using a pspline basis
basehaz

Compute the baseline survival curve for a Cox model
cox.zph

Test the Proportional Hazards Assumption of a Cox Regression
survobrien

O'Brien's Test for Association of a Single Variable with Survival
survSplit

Split a survival data set at specified times
survfit

Compute a Survival Curve for Censored Data
attrassign

Create new-style "assign" attribute
residuals.coxph

Calculate Residuals for a `coxph' Fit
lines.survfit

Add Lines or Points to a Survival Plot
rats

Rat data from Gail et al.
print.summary.survfit

Print Survfit Summary
ratetable

Ratetable reference in formula
survreg.control

Package options for survreg and coxph
predict.survreg

Predicted Values for a `survreg' Object
aareg

Aalen's additive regression model for censored data
print.aareg

Print an aareg object
survConcordance

Compute a concordance measure.
lung

NCCTG Lung Cancer Data
pbc

Mayo Clinic Primary Biliary Cirrhosis Data
survexp

Compute Expected Survival
coxph

Fit Proportional Hazards Regression Model
kidney

Kidney catheter data
summary.survfit

Summary of a Survival Curve
print.summary.coxph

Print method for summary.coxph objects
mgus

Monoclonal gammapothy data
ridge

Ridge regression
pbcseq

Mayo Clinic Primary Biliary Cirrhosis, sequential data
summary.aareg

Summarize an aareg fit
survival-internal

Internal survival functions
strata

Identify Stratification Variables
dsurvreg

Distributions available in survreg.
clogit

Conditional logistic regression
print.survfit

Print a Short Summary of a Survival Curve
plot.aareg

Plot an aareg object.
survfit.object

Survival Curve Object
survreg.object

Parametric Survival Model Object
stanford2

More Stanford Heart Transplant data
residuals.survreg

Compute Residuals for `survreg' Objects
veteran

Veterans' Administration Lung Cancer study
pyears

Person Years
nwtco

Data from the National Wilm's Tumor Study
survregDtest

Verify a survreg distribution
survreg

Regression for a Parametric Survival Model
tobin

Tobin's Tobit data
tcut

Factors for person-year calculations
untangle.specials

Help Process the `specials' Argument of the `terms' Function.
cch

Fits proportional hazards regression model to case-cohort data
aml

Acute Myelogenous Leukemia survival data
frailty

Random effects terms
survexp.fit

Compute Expected Survival