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survival (version 2.38-1)

Survival Analysis

Description

Contains the core survival analysis routines, including definition of Surv objects, Kaplan-Meier and Aalen-Johansen (multi-state) curves, Cox models, and parametric accelerated failure time models.

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Version

Install

install.packages('survival')

Monthly Downloads

98,782

Version

2.38-1

License

LGPL (>= 2)

Maintainer

Terry Therneau

Last Published

February 24th, 2015

Functions in survival (2.38-1)

Fit Proportional Hazards Regression Model

Stanford Heart Transplant data

Bladder Cancer Recurrences

Identify Stratification Variables

Aalen's additive regression model for censored data

Summarize an aareg fit

Chemotherapy for Stage B/C colon cancer

Add Lines or Points to a Survival Plot

Verify a survreg distribution

model.frame.coxph

Model.frame method for coxph objects

Assay of serum free light chain for 7874 subjects.

Fits proportional hazards regression model to case-cohort data

summary.survexp

Summary function for a survexp object

Monoclonal gammapothy data

Analysis of Deviance for a Cox model.

Create new-style "assign" attribute

Conditional logistic regression

Ovarian Cancer Survival Data

Ratetable reference in formula

Regression for a Parametric Survival Model

Mayo Clinic Primary Biliary Cirrhosis Data

Mayo Clinic Primary Biliary Cirrhosis, sequential data

Monoclonal gammapothy data

Create a Survival Object

Convert date objects to ratetable form

survfit.formula

Compute a Survival Curve for Censored Data

Summary method for Cox models

survfitcoxph.fit

A direct interface to the `computational engine' of survfit.coxph

Data from the 1972-78 GSS data used by Logan

Cox model fitting functions

Compute a Survival Curve from a Cox model

Smoothing splines using a pspline basis

Chronic Granulotomous Disease data

Print an aareg object

Find the index of the closest value in data set 2, for each entry in data set one.

Test the Proportional Hazards Assumption of a Cox Regression

Predictions for a Cox model

survreg.distributions

Parametric Survival Distributions

Acute Myelogenous Leukemia survival data

Time based merge for survival data

Veterans' Administration Lung Cancer study

quantile.survfit

Quantiles from a survfit object

Rat data from Gail et al.

residuals.coxph

Calculate Residuals for a `coxph' Fit

print.summary.survexp

Print Survexp Summary

Chronic Granulotomous Disease data

Compute Expected Survival

Liver transplant waiting list

survreg.control

Package options for survreg and coxph

predict.survreg

Predicted Values for a `survreg' Object

residuals.survreg

Compute Residuals for `survreg' Objects

Census Data Sets for the Expected Survival and Person Years Functions

print.summary.coxph

Print method for summary.coxph objects

Survival Curve Object

model.matrix.coxph

Model.matrix method for coxph models

Print a Short Summary of a Survival Curve

print.summary.survfit

Print Survfit Summary

Create survival curves

summary.survfit

Summary of a Survival Curve

Data from the National Wilm's Tumor Study

Details of a Cox Model Fit

O'Brien's Test for Association of a Single Variable with Survival

Compute Expected Survival

Parametric Survival Model Object

Factors for person-year calculations

Alias for the survfit function

Identify clusters.

Rat treatment data from Mantel et al

Verify that an object is of class ratetable.

NCCTG Lung Cancer Data

More Stanford Heart Transplant data

Ridge regression

survival-internal

Internal survival functions

Plot method for survfit objects

Split a survival data set at specified times

Tobin's Tobit data

Projected US Population

survConcordance

Compute a concordance measure.

Kidney catheter data

Compute a quadratic form

Plot an aareg object.

Random effects terms

untangle.specials

Help Process the `specials' Argument of the `terms' Function.

Test Survival Curve Differences

Ancillary arguments for controling coxph fits

Distributions available in survreg.

Proportional Hazards Regression Object

Graphical Test of Proportional Hazards