⚠️There's a newer version (3.0.1) of this package. Take me there.

sybilccFBA (version 1.0.0)

Cost Constrained FLux Balance Analysis: MetabOlic Modeling with ENzyme kineTics (MOMENT)

Description

implement cost constrained flux balance analysis as described in Adadi, R., Volkmer, B., Milo, R., Heinemann, M., & Shlomi, T. (2012). Prediction of Microbial Growth Rate versus Biomass Yield by a Metabolic Network with Kinetic Parameters, 8(7). doi:10.1371/journal.pcbi.1002575. Flux balance analysis is a technique to find fluxes in metabolic models at steady state. It is described in Orth, J.D., Thiele, I. and Palsson, B.O. What is flux balance analysis? Nat. Biotech. 28, 245-248 (2010)

Copy Link

Version

Down Chevron

Install

install.packages('sybilccFBA')

Monthly Downloads

40

Version

1.0.0

License

GPL-3

Last Published

April 2nd, 2014

Functions in sybilccFBA (1.0.0)