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synapseClient (version 1.14-0)

Synapse R Client from Sage Bionetworks

Description

Contains a set of functions for interacting with the Synapse REST services.

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Version

Version

1.14-0

License

GPL

Maintainer

Bruce Hoff

Last Published

February 15th, 2017

Functions in synapseClient (1.14-0)

Folder

Synapse Folder Constructor
annotValue<--methods

Methods for Function annotValue<-
annotValue-methods

Methods for Function annotValue
generatedBy<--methods

generatedBy<-
as.list

as.list
properties-methods

~~ Methods for Function properties ~~
properties

Functions for Manipulating Entity Properties
as.tableColumns

as.tableColumns
Evaluation

Evaluation Constructor
executed<--methods

executed<-
names

names
onWeb-methods

~~ Methods for Function onWeb ~~
annotations-methods

Methods for Function annotations
annotations

Entity Annotations
generatedBy

generatedBy
getActivity-methods

getActivity
deleteProperty-methods

~~ Methods for Function deleteProperty ~~
deleteAnnotation-methods

~~ Methods for Function deleteAnnotation ~~
Project

Synapse Project Constructor
onWeb

View an Entity's Synapse Web Page
setApiCredentials

setApiCredentials
setPackageName

setPackageName
propertyValues-methods

~~ Methods for Function propertyValues ~~
QueryResult

Retrieve Query Results
annotationValues<--methods

Methods for Function annotationValues<-
executed

executed
annotationValues-methods

~~ Methods for Function annotationValues ~~
getFileLocation

getFileLocation
File

Synapse File Constructor
getParentEntity-methods

~~ Methods for Function getParentEntity ~~
propertyValue<--methods

~~ Methods for Function propertyValue<- ~~
propertyNames

propertyNames
synAddColumn

synAddColumn
synAnnot

synAnnot
synapseAuthServiceEndpoint

Synapse Endpoints
synapseCacheDir

Synapse Local File Cache Directory
sendMessage

sendMessage
sessionToken

Refresh the Auth Service Session Token
annotationNames

annotationNames
Activity

Activity Constructor
length

length
hmacSecretKey

hmacSecretKey
SynapseEntityMethods

DEPRECATED Entity Methods
synapseExecute

Execute Code and Upload Results to Synapse
synDeleteRows

synDeleteRows
synDownloadTableColumns

synDownloadTableColumns
synGetAnnotation

synGetAnnotation
synGetActivity

synGetActivity
synapseQuery

Query The Synapse API
synapseLogin

Authentication
SynapseEntity

DEPRECATED Entity Constructors
synapseClient-package

Synapse Client
synGetAnnotations

synGetAnnotations
synGetColumns

synGetColumns
synGetWikiHeaders

synGetWikiHeaders
synRemoveColumn

synRemoveColumn
synGetSubmission

synGetSubmission
Table

Table Constructor
synGetProperty

synGetProperty
Update Entity Access Control List

Update Entity Access Control List
propertyValue-methods

~~ Methods for Function propertyValue ~~
WikiPage

Constructor for WikiPage
synSetEndpoints

synSetEndpoints
synSetAnnotations

synSetAnnotations
propertyValues<--methods

~~ Methods for Function propertyValues<- ~~
submit

submit
SubmissionStatus

Constructor for SubmissionStatus
synGet

Retrieve an object from Synapse
synDownloadTableFile

synDownloadTableFile
synGetParticipants

synGetParticipants
synGetSubmissions

synGetSubmissions
synGetProperties

synGetProperties
synGetSubmissionStatus

synGetSubmissionStatus
used<--methods

used<-
used

used
synGetEvaluation

synGetEvaluation
synDelete

synDelete
Delete Entity Access Control List

Delete Entity Access Control List
synGetWiki

synGetWiki
synGetUserProfile

synGetUserProfile
synGetOwnSubmissions

synGetOwnSubmissions
TableSchema

TableSchema Constructor
synStore

Store an object in Synapse
touOnWeb

View the Synapse Terms of Use as a Web Page
synTableQuery

synTableQuery
UserProfile

Constructor for UserProfile
Get Entity Access Control List

Get Entity Access Control List
synGetEndpoints

synGetEndpoints
Create Entity Access Control List

Create Entity Access Control List
synapseGet

Synapse REST
WikiHeader

Constructor for WikiHeader
synRestGET

Synapse REST Functions
synSetProperties

synSetProperties
synSetAnnotation

synSetAnnotation
synSetProperty

synSetProperty