taxa (version 0.3.3)

n_subtaxa_1: Get number of subtaxa

Description

Get number of subtaxa for each taxon in an object of type taxonomy() or taxmap(), not including subtaxa of subtaxa etc. This does not include subtaxa assigned to subtaxa.

obj$n_subtaxa_1()
n_subtaxa_1(obj)

Arguments

obj

(taxonomy() or taxmap())

Value

numeric

See Also

Other taxonomy data functions: classifications(), id_classifications(), is_branch(), is_internode(), is_leaf(), is_root(), is_stem(), map_data_(), map_data(), n_leaves_1(), n_leaves(), n_subtaxa(), n_supertaxa_1(), n_supertaxa(), taxon_ids(), taxon_indexes(), taxon_names(), taxon_ranks()

Examples

# NOT RUN {
# Count number of immediate subtaxa in each taxon
n_subtaxa_1(ex_taxmap)

# Filter taxa based on number of subtaxa
#  (this command removed all leaves or "tips" of the tree)
filter_taxa(ex_taxmap, n_subtaxa_1 > 0)

# }

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