phylomatic_format

internal

Interacts with a suite of web application programming interfaces
(API) for taxonomic tasks, such as getting database specific taxonomic
identifiers, verifying species names, getting taxonomic hierarchies, fetching
downstream and upstream taxonomic names, getting taxonomic synonyms, converting
scientific to common names and vice versa, and more. Some of the services
supported include 'NCBI E-utilities' (<https://www.ncbi.nlm.nih.gov/books/NBK25501/>),
'Encyclopedia of Life' (<https://eol.org/docs/what-is-eol/data-services>),
'Global Biodiversity Information Facility' (<https://techdocs.gbif.org/en/openapi/>),
and many more. Links to the API documentation for other supported services are
available in the documentation for their respective functions in this package.

Zachary Foster

taxize

Taxonomic Information from Around the Web

Scott Chamberlain

Eduard Szoecs

Zebulun Arendsee

Carl Boettiger

Karthik Ram

Ignasi Bartomeus

John Baumgartner

James O'Donnell

Jari Oksanen

Bastian Greshake Tzovaras

Philippe Marchand

Vinh Tran

Maëlle Salmon

Gaopeng Li

Matthias Grenié

rOpenSci 

phylomatic_format function

<dl><dt>...</dt>
<dd>Parameters, ignored</dd></dl>

Arguments

Get family names to make Phylomatic input object, and output input string
to Phylomatic for use in the function phylomatic_tree. — phylomatic_format

<dl>

<dt>...</dt>
<dd>Parameters, ignored</dd>

</dl>

Get family names to make Phylomatic input object, and output input string
to Phylomatic for use in the function phylomatic_tree.

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phylomatic_format: Get family names to make Phylomatic input object, and output input string to Phylomatic for use in the function phylomatic_tree.

Description

Usage

Arguments