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tcR (version 1.1)

assymetry: Normalised log assymetry.

Description

Compute the value of the normalised log assymetry measure for the given data.frames of the counts of shared clones.

Usage

assymetry(.alpha, .beta = NULL, .by = "CDR3.nucleotide.sequence")

Arguments

.alpha
First mitcr data.frame or a list with data.frames.
.beta
Second mitcr data.frame or NULL if .alpha is a list.
.by
Which column use to merge. See "Details".

Value

  • Value of the normalised log assymetry measure for the given data.frames.

Details

Merge two data frames by the given column and compute value Sum(Log((Percentage for shared clone S from alpha) / (Percentage for shared clone S from beta))) / (# of shared clones).