kmer.table
- generate table with the most frequent k-mers.get.kmer.column
- get vector of k-mers from the k-mer table from the function kmer.table
kmer.table(.data, .heads = c(10, 100, 300, 1000, 3000, 10000, 30000), .nrow = 20,
.clean = T, .meat = F)get.kmer.column(.kmer.table.list, .head)
head()
function, supplied sequentialy to the get.kmers()
function. -1 means all rows.get.kmers()
function.get.kmers()
function.kmer.table
function if .data
supplied as a list.kmer.table
- if .data
is a data frame, than data frame with columns like "Kmers.X", "Count.X" where X - element from .heads
.
If .data
is a list, than list of such data frames.get.kmer.column
- data frame with first column with kmers and other columns named as a names of data frames, from which .kmer.table.list
was generated.