MC2_Methods

mc2_mthds


<code>mc2_mthds</code> returns a list of correction/transformation functions 
to be used during level 2 multiple-concentration processing.


A set of tools for processing and modeling high-throughput and
high-content chemical screening data. The package was developed for the
the chemical screening data generated by the US EPA ToxCast program, but
can be used for diverse chemical screening efforts.

Dayne L Filer

tcpl

ToxCast Data Analysis Pipeline

MC2_Methods function

 More information about the level 2 multiple-concentration processing is 
available in the package vignette, "Pipeline_Overview." <dl>
  <dt>log2</dt><dd>Take the logarithm of cval with the base 2.</dd> <dt>log10</dt><dd>Take the logarithm of cval with the base 10.</dd> <dt>rmneg</dt><dd>Remove entries where cval is less than 0.</dd> <dt>rmzero</dt><dd>Remove entries where cval is 0.</dd> <dt>mult25</dt><dd>Multiply cval by 25.</dd> <dt>mult100</dt><dd>Multiply cval by 100.</dd> <dt>negshift</dt><dd>Shift cval by subtracting out the minimum of cval and 
  adding 1, such that the new minimum of cval is 1.</dd> <dt>mult25</dt><dd>Multiply cval by 2.5.</dd> <dt>mult3</dt><dd>Multiply cval by 3.</dd> <dt>mult6</dt><dd>Multiply cval by 6.</dd> </dl> 

MC2_Methods: List of level 2 multiple-concentration correction functions

Description

Usage

Arguments

Value

Available Methods

Details

See Also