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tcpl (version 1.2.2)

SC2_Methods: List of level 2 single-concentration hit-call functions

Description

sc2_mthds returns a list of functions to be used during level 2 single-concentration processing.

Usage

sc2_mthds()

Arguments

Value

A list functions

Available Methods

More information about the level 2 single-concentration processing is available in the package vignette, "Pipeline_Overview."
bmad3
Add a cutoff value of 3*bmad.
pc20
Add a cutoff value of 20.
log2_1.2
Add a cutoff value of log2(1.2).
log10_1.2
Add a cutoff value of log10(1.2).
bmad5
Add a cutoff value of 5*bmad.
bmad6
Add a cutoff value of 6*bmad.
bmad10
Add a cutoff value of 10*bmad.
pc30orbmad3
Add a cutoff value of either 30 or 3*bmad, whichever is less.

Details

The functions contained in the list returned by sc2_mthds return a list of expressions to be executed in the sc2 (not exported) function environment. The functions are described here for reference purposes, The sc2_mthds function is not exported, nor is it intended for use.

All available methods are described in the Available Methods section, listed by the function/method name.

See Also

sc2, Method functions to query what methods get applied to each acid