concRespPlot2

This function takes output from `concRespCore` or `tcplhit2_core` to
generate a basic plot of the observed concentration-response data and the
best fit curve (winning model). A `ggplot` object, which users may customize
with additional `ggplot` layers, is returned.

The tcplfit2 R package performs basic concentration-response curve fitting. The original tcplFit() function in the tcpl R package performed basic concentration-response curvefitting to 3 models. With tcplfit2, the core tcpl concentration-response functionality has been expanded to process diverse high-throughput screen (HTS) data generated at the US Environmental Protection Agency, including targeted ToxCast, high-throughput transcriptomics (HTTr) and high-throughput phenotypic profiling (HTPP). tcplfit2 can be used independently to support analysis for diverse chemical screening efforts.

Jason Brown

tcplfit2

A Concentration-Response Modeling Utility

Thomas Sheffield

Richard S Judson

Sarah E. Davidson

Zhihui Zhao

Madison Feshuk

Katie Paul Friedman

concRespPlot2 function

<dl><dt>row</dt>
<dd>Output from `concRespCore` or `tcplhit2_core`, containing information
about the best fit curve (winning model).</dd>
<dt>log_conc</dt>
<dd>Logical argument. If `TRUE`, convert the concentrations (x-axis)
into log-10 scale. Defaults to `FALSE`.</dd></dl>

Arguments

Concentration Response Plot - ggplot2 — concRespPlot2

<dl>

<dt>row</dt>
<dd>Output from `concRespCore` or `tcplhit2_core`, containing information
about the best fit curve (winning model).</dd>


<dt>log_conc</dt>
<dd>Logical argument. If `TRUE`, convert the concentrations (x-axis)
into log-10 scale. Defaults to `FALSE`.</dd>

</dl>

concRespPlot2: Concentration Response Plot - ggplot2

Description

Usage

Value

Arguments