teal.modules.general (version 0.4.1)

tm_variable_browser: teal module: Variable browser

Description

Module provides provides a detailed summary and visualization of variable distributions for data.frame objects, with interactive features to customize analysis.

Usage

tm_variable_browser(
  label = "Variable Browser",
  datasets_selected = deprecated(),
  datanames = if (missing(datasets_selected)) "all" else datasets_selected,
  parent_dataname = "ADSL",
  pre_output = NULL,
  post_output = NULL,
  ggplot2_args = teal.widgets::ggplot2_args(),
  transformators = list()
)

Value

Object of class teal_module to be used in teal applications.

Arguments

label

(character(1)) Label shown in the navigation item for the module or module group. For modules() defaults to "root". See Details.

datasets_selected

(character) vector of datasets to show, please use the datanames argument.

datanames

(character) Names of the datasets relevant to the item. There are 2 reserved values that have specific behaviors:

• The keyword "all" includes all datasets available in the data passed to the teal application.

• NULL hides the sidebar panel completely.

• If transformators are specified, their datanames are automatically added to this datanames argument.

parent_dataname

(character(1)) string specifying a parent dataset. If it exists in datanames then an extra checkbox will be shown to allow users to not show variables in other datasets which exist in this dataname. This is typically used to remove ADSL columns in CDISC data. In non CDISC data this can be ignored. Defaults to "ADSL".

pre_output

(shiny.tag) optional, text or UI element to be displayed before the module's output, providing context or a title. with text placed before the output to put the output into context. For example a title.

post_output

(shiny.tag) optional, text or UI element to be displayed after the module's output, adding context or further instructions. Elements like shiny::helpText() are useful.

ggplot2_args

(ggplot2_args) object created by teal.widgets::ggplot2_args() with settings for the module plot. The argument is merged with options variable teal.ggplot2_args and default module setup.

For more details see the vignette: vignette("custom-ggplot2-arguments", package = "teal.widgets")

transformators

(list of teal_transform_module) that will be applied to transform module's data input. To learn more check vignette("transform-input-data", package = "teal").

Examples in Shinylive

example-1

Open in Shinylive

example-2

Open in Shinylive

Details

Numeric columns with fewer than 30 distinct values can be treated as either discrete or continuous with a checkbox allowing users to switch how they are treated(if < 6 unique values then the default is discrete, otherwise it is continuous).

Examples

# general data example
data <- teal_data()
data <- within(data, {
  iris <- iris
  mtcars <- mtcars
  women <- women
  faithful <- faithful
  CO2 <- CO2
})

app <- init(
  data = data,
  modules = modules(
    tm_variable_browser(
      label = "Variable browser"
    )
  )
)
if (interactive()) {
  shinyApp(app$ui, app$server)
}

# CDISC example data
library(sparkline)
data <- teal_data()
data <- within(data, {
  ADSL <- teal.data::rADSL
  ADTTE <- teal.data::rADTTE
})
join_keys(data) <- default_cdisc_join_keys[names(data)]

app <- init(
  data = data,
  modules = modules(
    tm_variable_browser(
      label = "Variable browser"
    )
  )
)
if (interactive()) {
  shinyApp(app$ui, app$server)
}