conv_thresholds

Takes a dataframe created by renorm_SSR and calculates the range in values
and then calculates thresholds given. Suggested values are
0.5, 0.1, and 0.005. The rSSR calculated for each MBP should decrease
with each increasing blanking period until they reach close to zero, which
We consider convergence. Since the rSSR curve generally bounces around an
assymptote and often does not reach or stay at 0, we set a threshold a priori
 for identifying convergence.

Analyze telemetry datasets generalized to allow
any technology. The filtering steps check for false positives caused by
reflected transmissions from surfaces and false pings from other noise
generating equipment. The filters are based on JSATS filtering algorithms
found in package 'filteRjsats' <https://CRAN.R-project.org/package=filteRjsats>
but have been generalized to allow the user to define many of the filtering
variables. Additionally, this package contains scripts used to help identify
an optimal maximum blanking period as defined in Capello et al (2015)
<doi:10.1371/journal.pone.0134002>. The functions were written according to
their manuscript description, but have not been reviewed by the authors for
accuracy. It is included here as is, without warranty.

Taylor Spaulding

telemetR

Filter and Analyze Generalised Telemetry Data from Organisms

conv_thresholds function

<dl><dt>rSSR_df</dt>
<dd>a dataframe created by created by renorm_SSRduration compare
showing the renormalized sum of squares of the residuals between one
potential blanking period and the next.</dd>
<dt>var_groups</dt>
<dd>a single string or vector of strings of the columns which
should be used to group organisms. Common groupings are species and cohorts.</dd>
<dt>thresh_levels</dt>
<dd>a single value or vector of values used to set
thresholds for identifying convergence.</dd></dl>

Arguments

Calculate Convergence Thresholds for the rSSR curve — conv_thresholds

<dl>

<dt>rSSR_df</dt>
<dd>a dataframe created by created by renorm_SSRduration compare
showing the renormalized sum of squares of the residuals between one
potential blanking period and the next.</dd>


<dt>var_groups</dt>
<dd>a single string or vector of strings of the columns which
should be used to group organisms. Common groupings are species and cohorts.</dd>


<dt>thresh_levels</dt>
<dd>a single value or vector of values used to set
thresholds for identifying convergence.</dd>

</dl>

conv_thresholds: Calculate Convergence Thresholds for the rSSR curve

Description

Usage

Value

Arguments

Examples