Performs a comprehensive comparison of coding patterns between different sets of annotations, analyzing differences in coverage, code application, overlaps, and code sequences.
generate_comparison_analysis(annotations_list)A list containing comparison results and analysis:
coding_strategies: list of analyzed coding patterns for each input
comparison: list of comparative analyses between coding patterns
A list of data frames, where each data frame contains annotations with columns:
start: numeric, starting position of annotation
end: numeric, ending position of annotation
code: character, code applied to the annotation