reorient_volume

Function to reshape data to `RAS` order

A fast, interactive cross-platform, and easy to share
'WebGL'-based 3D brain viewer that visualizes 'FreeSurfer' and/or
'AFNI/SUMA' surfaces. The viewer widget can be either standalone or
embedded into 'R-shiny' applications. The standalone version only require
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support allows the 3D viewer to be dynamically generated from reactive user
inputs. This feature has been fully adopted by 'RAVE'
<https://openwetware.org/wiki/RAVE>, an interactive toolbox to
analyze 'iEEG' data. Documentation about 'threeBrain' is provided
by <https://dipterix.org/threeBrain/> and several vignettes included
in this package. To cite the package, please check our 'NeuroImage' paper
by Magnotti, Wang, and Beauchamp (2020, <doi:10.1016/j.neuroimage.2020.117341>),
or see 'citation("threeBrain")' for details.

Zhengjia Wang

threeBrain

3D Brain Visualization

John Magnotti

Xiang Zhang

Brian Metzger

Elizabeth Nesbitt

Meng Li

Michael Beauchamp

reorient_volume function

<dl><dt>volume, </dt>
<dd>3-mode tensor (voxels), usually from `mgz`, `nii`, or `BRIK` files</dd>
<dt>Torig</dt>
<dd>a <code>4x4</code> transform matrix mapping volume (`CRS`) to `RAS`</dd></dl>

Arguments

Function to reshape data to `RAS` order — reorient_volume

<dl>

<dt>volume, </dt>
<dd>3-mode tensor (voxels), usually from `mgz`, `nii`, or `BRIK` files</dd>


<dt>Torig</dt>
<dd>a <code>4x4</code> transform matrix mapping volume (`CRS`) to `RAS`</dd>

</dl>

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reorient_volume: Function to reshape data to `RAS` order

Description

Usage

Value

Arguments