tidycwl (version 1.0.7)

parse_outputs: Parse the outputs of the CWL workflow into a data frame

Description

Parse the outputs of the CWL workflow into a data frame

Usage

parse_outputs(x, simplify = TRUE)

Arguments

x

CWL object

simplify

Simplify the list as a data frame?

Value

List or data frame of outputs

Examples

# NOT RUN {
system.file("cwl/sbg/workflow/rnaseq-salmon.json", package = "tidycwl") %>%
  read_cwl_json() %>%
  parse_outputs() %>%
  names()

system.file("cwl/sbg/workflow/rnaseq-salmon.cwl", package = "tidycwl") %>%
  read_cwl_yaml() %>%
  parse_outputs() %>%
  names()
# }