load_example_gt

This function creates a <code>gen_tibble</code> object for use in examples in
documentation.

We provide a tidy grammar of population genetics, facilitating
the manipulation and analysis of data on biallelic single nucleotide
polymorphisms (SNPs). 'tidypopgen' scales to very large genetic datasets
by storing genotypes on disk, and performing operations on them in
chunks, without ever loading all data in memory. The full
functionalities of the package are described in Carter et al. (2025)
<doi:10.1111/2041-210x.70204>.

Andrea Manica

tidypopgen

Tidy Population Genetics

Evie Carter

Eirlys Tysall

Chang Christopher

Shaun Purcell

Bengtsson Henrik

load_example_gt function

<dl><dt>type</dt>
<dd>a character string indicating the type of <code>gen_tibble</code> to create:<ul>
<li>"gen_tbl": a basic gen_tibble with genotype data and metadata</li>
<li>"grouped_gen_tbl": same as "gen_tbl" but grouped by population</li>
<li>"grouped_gen_tbl_sf": adds spatial features (longitude/latitude)
and groups by population</li>
<li>"gen_tbl_sf": adds spatial features without grouping</li>
</ul></dd></dl>

Arguments

Load example gen_tibble — load_example_gt

<dl>

<dt>type</dt>
<dd>a character string indicating the type of <code>gen_tibble</code> to create:<ul>
<li>"gen_tbl": a basic gen_tibble with genotype data and metadata</li>
<li>"grouped_gen_tbl": same as "gen_tbl" but grouped by population</li>
<li>"grouped_gen_tbl_sf": adds spatial features (longitude/latitude)
and groups by population</li>
<li>"gen_tbl_sf": adds spatial features without grouping</li>
</ul></dd>

</dl>

load_example_gt: Load example gen_tibble

Description

Usage

Value

Arguments

Examples