tigger-package

_PACKAGE

Infers the V genotype of an individual from immunoglobulin (Ig) repertoire sequencing data (AIRR-Seq, Rep-Seq). Includes detection of any novel alleles. This information is then used to correct existing V allele calls from among the sample sequences. Citations: Gadala-Maria, et al (2015) tools:::Rd_expr_doi("10.1073/pnas.1417683112"), Gadala-Maria, et al (2019) tools:::Rd_expr_doi("10.3389/fimmu.2019.00129").

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Infers the V genotype of an individual from immunoglobulin (Ig)
repertoire sequencing data (AIRR-Seq, Rep-Seq). Includes detection of
any novel alleles. This information is then used to correct existing V
allele calls from among the sample sequences.
Citations:
Gadala-Maria, et al (2015) <doi:10.1073/pnas.1417683112>,
Gadala-Maria, et al (2019) <doi:10.3389/fimmu.2019.00129>.

Susanna Marquez

tigger

Infers Novel Immunoglobulin Alleles from Sequencing Data

Daniel Gadala-Maria

Moriah Cohen

Jason Vander Heiden

Gur Yaari

Steven Kleinstein

tigger-package function

Maintainer: Susanna Marquez <a href="/link/susanna.marquez%40yale.edu?package=tigger&version=1.1.0" data-mini-rdoc="tigger::susanna.marquez@yale.edu">susanna.marquez@yale.edu</a>
Authors:<ul>
<li>Daniel Gadala-Maria <a href="/link/daniel.gadala-maria%40yale.edu?package=tigger&version=1.1.0" data-mini-rdoc="tigger::daniel.gadala-maria@yale.edu">daniel.gadala-maria@yale.edu</a></li>
<li>Moriah Cohen <a href="/link/moriah.cohen%40biu.ac.il?package=tigger&version=1.1.0" data-mini-rdoc="tigger::moriah.cohen@biu.ac.il">moriah.cohen@biu.ac.il</a></li>
<li>Jason Vander Heiden <a href="/link/jason.vanderheiden%40gmail.com?package=tigger&version=1.1.0" data-mini-rdoc="tigger::jason.vanderheiden@gmail.com">jason.vanderheiden@gmail.com</a></li>
<li>Gur Yaari <a href="/link/gur.yaari%40biu.ac.il?package=tigger&version=1.1.0" data-mini-rdoc="tigger::gur.yaari@biu.ac.il">gur.yaari@biu.ac.il</a></li>
<li>Steven Kleinstein <a href="/link/steven.kleinstein%40yale.edu?package=tigger&version=1.1.0" data-mini-rdoc="tigger::steven.kleinstein@yale.edu">steven.kleinstein@yale.edu</a> [copyright holder]</li>
</ul>

Author

tigger: Infers Novel Immunoglobulin Alleles from Sequencing Data — tigger-package

Maintainer: Susanna Marquez <a href='mailto:susanna.marquez@yale.edu'>susanna.marquez@yale.edu</a>
Authors:<ul>
<li>Daniel Gadala-Maria <a href='mailto:daniel.gadala-maria@yale.edu'>daniel.gadala-maria@yale.edu</a></li>
<li>Moriah Cohen <a href='mailto:moriah.cohen@biu.ac.il'>moriah.cohen@biu.ac.il</a></li>
<li>Jason Vander Heiden <a href='mailto:jason.vanderheiden@gmail.com'>jason.vanderheiden@gmail.com</a></li>
<li>Gur Yaari <a href='mailto:gur.yaari@biu.ac.il'>gur.yaari@biu.ac.il</a></li>
<li>Steven Kleinstein <a href='mailto:steven.kleinstein@yale.edu'>steven.kleinstein@yale.edu</a> [copyright holder]</li>
</ul>

tigger-package: tigger: Infers Novel Immunoglobulin Alleles from Sequencing Data

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Author

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