tigre-package

tigre


  This package implements the method of Gao et al. (2008) and Honkela et
  al. (2010) for Gaussian process modelling single input motif
  regulatory systems with time-series expression data. The method can be
  used to rank potential targets of transcription factors based on such
  data.


 package

The tigre package implements our methodology of Gaussian
process differential equation models for analysis of gene
expression time series from single input motif networks. The
package can be used for inferring unobserved transcription
factor (TF) protein concentrations from expression measurements
of known target genes, or for ranking candidate targets of a
TF.

Antti Honkela

Transcription factor Inference through Gaussian process
Reconstruction of Expression

tigre-package function

This package implements the method of Gao et al. (2008) and Honkela et
  al. (2010) for Gaussian process modelling single input motif
  regulatory systems with time-series expression data. The method can be
  used to rank potential targets of transcription factors based on such
  data.

tigre-package: tigre - Transcription factor Inference through Gaussian process Reconstruction of Expression

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Arguments

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