ENSEXONS_37

exons on chrY and chrM were excluded from the exon dataset

datasets

Gene and exon information from Ensembl genome builds GRCh38.p13 (104) and GRCh37 (v40) to use with the 'topr' package.

Thorhildur Juliusdottir

toprdata

Gene and Exon Data from Ensembl

Andri Stefansson

ENSEXONS_37 function

A data frame with 62,739 rows and 7 variables:<dl>
<dt>chrom</dt>
<dd>Chromosome on build version 38 (GRCh38/hg38)</dd><dt>gene_start</dt>
<dd>genetic position of gene start on build version 38</dd><dt>gene_end</dt>
<dd>genetic position of gene end on build version 38</dd><dt>gene_symbol</dt>
<dd>The name of the gene</dd><dt>exon_chromstart</dt>
<dd>genetic positions of exon start</dd><dt>exon_chromend</dt>
<dd>genetic position of exon end</dd>
</dl>

Format

Ensembl exons build HG37 (GRCh37) v40 from gencode — ENSEXONS_37

A data frame with 62,739 rows and 7 variables:<dl>
<dt>chrom</dt>
<dd>Chromosome on build version 38 (GRCh38/hg38)</dd>

<dt>gene_start</dt>
<dd>genetic position of gene start on build version 38</dd>

<dt>gene_end</dt>
<dd>genetic position of gene end on build version 38</dd>

<dt>gene_symbol</dt>
<dd>The name of the gene</dd>

<dt>exon_chromstart</dt>
<dd>genetic positions of exon start</dd>

<dt>exon_chromend</dt>
<dd>genetic position of exon end</dd>


</dl>

ENSEXONS_37: Ensembl exons build HG37 (GRCh37) v40 from gencode

Description

Usage

Arguments

Format