tox_chemicals

<p>Downloaded from the CompTox database on October 2022.
<a href="https://comptox.epa.gov/dashboard/">https://comptox.epa.gov/dashboard/</a>. Additional columns were
added based on the information from the "INVITRODB_V3_5_LEVEL5" data.</p>

datasets

Data analysis package for estimating potential biological effects from chemical concentrations in environmental samples. Included are a set of functions to analyze, visualize, and organize measured concentration data as it relates to user-selected chemical-biological interaction benchmark data such as water quality criteria. The intent of these analyses is to develop a better understanding of the potential biological relevance of environmental chemistry data. Results can be used to prioritize which chemicals at which sites may be of greatest concern. These methods are meant to be used as a screening technique to predict potential for biological influence from chemicals that ultimately need to be validated with direct biological assays. A description of the analysis can be found in Blackwell (2017) <doi:10.1021/acs.est.7b01613>.

Laura DeCicco

toxEval

Exploring Biological Relevance of Environmental Chemistry
Observations

Steven Corsi

Daniel Villeneuve

Brett Blackwell

Gerald Ankley

Alison Appling

Dalma Martinovic

tox_chemicals function

<p>Downloaded from the CompTox database on October 2022.
<a href='https://comptox.epa.gov/dashboard/'>https://comptox.epa.gov/dashboard/</a>. Additional columns were
added based on the information from the "INVITRODB_V3_5_LEVEL5" data.</p>

ToxCast Chemical Information — tox_chemicals

ToxCast Chemical Information

Column	Description
DSSTox_Substance_Id	DSSTox_Substance_Id
Substance_Name	Commen chemical name
Structure_MolWt	Molecular weight
DTXCID	DTXCID
Substance_CASRN	CASRN
INCHIKEY	INCHIKEY
SMILES	SMILES
Total_tested	Total number of ToxCast assays tested
Active	Number of ToxCast assays flagged as active
min_concentration	Minimum concentration tested in ToxCast (ug/L)
max_concentration	Maximum concentration tested in ToxCast (ug/L)

tox_chemicals: ToxCast Chemical Information

Description

Arguments

Value

Examples