toxplot (version 0.1.1)

normalize_per_plate: normalize per plate

Description

normalize raw readings as percent of median vehicle control wells

Usage

normalize_per_plate(dt, nctrl = "DMSO")

Arguments

dt

data.frame contains essential columns with the raw data.

nctrl

the name (spid) of the vehicle/solvent control used for calculation

Value

data.frame with normalized value columns. 'nval_mean' column is the normalized value calculated using the mean of vehicle control wells, 'nval_median' column is the normalized value calculated using the median of vehicle control wells.

Examples

# NOT RUN {
## normalize demo data
demo_mc_norm <- normalize_per_plate(demo_mc, nctrl = "DMSO")

# }