example_data

<p>example_data is genemapper output peak table</p>

datasets

A pipeline for short tandem repeat instability analysis from fragment analysis data. Inputs of fsa files or peak tables, and a user supplied metadata data-frame. The package identifies ladders, calls peaks, identifies the modal peaks, calls repeats, then calculates repeat instability metrics (e.g. expansion index from Lee et al. (2010) <doi:10.1186/1752-0509-4-29>).

Zachariah McLean

trace

Tandem Repeat Analysis by Capillary Electrophoresis

Kevin Correia

Andrew Jiang

example_data function


<div class="section" id="example-data">
<h3><code>example_data</code></h3><p></p><p>
</p><p>A genemapper output dataframe</p>
</div>


Format

example_data — example_data


<div class='section' id='example-data'>
<h3><code>example_data</code></h3>


<p>A genemapper output dataframe</p>
</div>


example_data: example_data

Description

Usage

Arguments

Format

`example_data`