trace (version 1.0.0)

extract_alleles: Extract Modal Peaks

Description

Extracts modal peak information from each sample in a list of fragments.

Usage

extract_alleles(fragments_list)

Value

A dataframe containing modal peak information for each sample

Arguments

fragments_list

A list of fragments objects containing fragment data.

Examples

fsa_list <- lapply(cell_line_fsa_list, function(x) x$clone())
# import data with read_fsa() to generate an equivalent list to cell_line_fsa_list
test_fragments <- trace(fsa_list, grouped = TRUE, metadata_data.frame = metadata)

extract_alleles(test_fragments)