remove_burn_ins

Removed the burn-ins from a data frame

'BEAST2' (<https://www.beast2.org>) is a widely used
Bayesian phylogenetic tool, that uses DNA/RNA/protein data
and many model priors to create a posterior of jointly estimated
phylogenies and parameters.
'Tracer' (<https://github.com/beast-dev/tracer/>) is a GUI tool
to parse and analyze the files generated by 'BEAST2'.
This package provides a way to parse and analyze 'BEAST2' input
files without active user input, but using
R function calls instead.

Richel Bilderbeek

tracerer

Tracer from R

Richèl J.C. Bilderbeek

Joëlle Barido-Sottani

David Winter

remove_burn_ins function

<dl><dt>traces</dt>
<dd>a data frame with traces</dd>
<dt>burn_in_fraction</dt>
<dd>the fraction that needs to be removed,
must be <code>[0,1&gt;</code>. Its default value of 10
as of Tracer</dd></dl>

Arguments

Author

Removed the burn-ins from a data frame — remove_burn_ins

<dl>

<dt>traces</dt>
<dd>a data frame with traces</dd>


<dt>burn_in_fraction</dt>
<dd>the fraction that needs to be removed,
must be <code>[0,1&gt;</code>. Its default value of 10
as of Tracer</dd>

</dl>

remove_burn_ins: Removed the burn-ins from a data frame

Description

Usage

Value

Arguments

Author