trackdem (version 0.6)

findMaxCost: Find maximum tracking cost

Description

This function can help to find a appropriate maximum value for linking a particle to another particle (parameter L in function trackParticles)

Usage

findMaxCost(particles, frame = 1, colorimages = NULL)

Value

Returns the number that is interactively chosen by the user. Use this value in trackParticles.

Arguments

particles

Object of class 'particles', obtained using identifyParticles.

frame

Number specifying which frame to use. Default is frame 1.

colorimages

Array containing original color images. By default, the original color images are obtained from the global environment.

Author

Marjolein Bruijning

Examples

if (FALSE) {
partIden <- identifyParticles(sbg=allImages,
                              threshold=-0.05)
maxcost <- findMaxCost(partIden,frame=1)
records <- trackParticles(partIden,L=maxcost,R=1)
}