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tractor.base (version 1.1.0)

Basic functions for the TractoR (tractography with R) bundle

Description

The tractor.base package consists of functions for working with magnetic resonance images. It can read and write image files stored in Analyze, NIfTI and DICOM formats (DICOM support is read only), generate images for use as regions of interest, and manipulate and visualise images.

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Version

Install

install.packages('tractor.base')

Monthly Downloads

518

Version

1.1.0

License

GPL-2

Maintainer

Jon Clayden

Last Published

June 16th, 2009

Functions in tractor.base (1.1.0)

visualisation

Visualise MriImage objects
NeighbourhoodInfo

Class representing a cuboidal neighbourhood in an image
implode

Create a character string by concatenating the elements of a vector
equivalent

Test two numeric vectors for equivalence
%~%

Test a character vector for a match against a regular expression
[.image.mri

Extract or replace subsets of the data in an MriImage object
serialisation

List object serialisation and deserialisation
output

The TractoR message reporting system
newMriImageMetadataFromTemplate

Duplicates an MriImageMetadata object, possibly with modification
MriImage

Class representing an MRI image
dictionary

DICOM tag dictionary
list.object

The list.object class
newMriImageFromDicom

Functions for reading images from DICOM files
MriImageMetadata

Class representing metadata associated with an MRI image
data types

MriImage data types
newMriImageFromFile

Working with MRI images stored in NIfTI and Analyze formats
newMriImageWithData

Functions for creating MriImage objects from data
Undocumented

Undocumented functions
isValidAs

Check whether an object can be coerced to a specified mode
DicomMetadata

Class representing metadata extracted from a DICOM header