traits v0.1.0
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Species Trait Data from Around the Web
Species trait data from many different sources, including
sequence data from 'NCBI', plant trait data from 'BETYdb', invasive species
data from the Global Invasive Species Database and 'EOL', 'Traitbank' data
from 'EOL', Coral traits data from http://coraltraits.org, 'nativity' status
('Flora Europaea' or 'ITIS'), and 'Birdlife' International.
Functions in traits
| Name | Description | |
| birdlife_habitat | Get bird habitat information from BirdLife/IUCN | |
| traitbank | Search for traits from EOL's Traitbank. | |
| leda | Access LEDA trait data | |
| ncbi_searcher | Search for gene sequences available for taxa from NCBI. | |
| ncbi_byname | Retrieve gene sequences from NCBI by taxon name and gene names. | |
| is_native | Check if a species is native somewhere | |
| traits-package | Species trait data from around the web | |
| eol_invasive_ | Search for presence of taxonomic names in EOL invasive species databases. | |
| betydb | Search for traits from BETYdb | |
| fe_native | Check species status (native, exotic, ...) for one species from Flora Europaea webpage | |
| birdlife_threats | Get bird threat information from BirdLife/IUCN | |
| ncbi_byid | Retrieve gene sequences from NCBI by accession number. | |
| plantatt | PLANTATT plant traits dataset | |
| coral | Search for coral data on coraltraits.org | |
| g_invasive | Check invasive species status for a set of species from GISD database | |
| No Results! | ||
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Details
| License | MIT + file LICENSE |
| URL | https://github.com/ropensci/traits |
| BugReports | http://www.github.com/ropensci/traits/issues |
| LazyData | true |
| VignetteBuilder | knitr |
| NeedsCompilation | no |
| Packaged | 2015-06-11 21:05:56 UTC; sacmac |
| Repository | CRAN |
| Date/Publication | 2015-06-12 08:00:36 |
| depends | base (>= 2.10) , R (>= 2.10) |
| imports | data , data.table , dplyr , httr , jsonlite , taxize , XML |
| suggests | knitr , plyr , roxygen2 , testthat |
| Contributors | Scott Chamberlain, Zachary Foster, Ignasi Bartomeus, David LeBauer |
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