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traits (version 0.1.0)

Species Trait Data from Around the Web

Description

Species trait data from many different sources, including sequence data from 'NCBI', plant trait data from 'BETYdb', invasive species data from the Global Invasive Species Database and 'EOL', 'Traitbank' data from 'EOL', Coral traits data from http://coraltraits.org, 'nativity' status ('Flora Europaea' or 'ITIS'), and 'Birdlife' International.

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Install

install.packages('traits')

Monthly Downloads

33

Version

0.1.0

License

MIT + file LICENSE

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Repository

https://github.com/ropensci/traits

Maintainer

Scott Chamberlain

Last Published

June 12th, 2015

Functions in traits (0.1.0)

birdlife_habitat

Get bird habitat information from BirdLife/IUCN

Search for traits from EOL's Traitbank.

Access LEDA trait data

Search for gene sequences available for taxa from NCBI.

Retrieve gene sequences from NCBI by taxon name and gene names.

Check if a species is native somewhere

Species trait data from around the web

Search for presence of taxonomic names in EOL invasive species databases.

Search for traits from BETYdb

Check species status (native, exotic, ...) for one species from Flora Europaea webpage

birdlife_threats

Get bird threat information from BirdLife/IUCN

Retrieve gene sequences from NCBI by accession number.

PLANTATT plant traits dataset

Search for coral data on coraltraits.org

Check invasive species status for a set of species from GISD database