traits v0.1.0

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Species Trait Data from Around the Web

Species trait data from many different sources, including sequence data from 'NCBI', plant trait data from 'BETYdb', invasive species data from the Global Invasive Species Database and 'EOL', 'Traitbank' data from 'EOL', Coral traits data from http://coraltraits.org, 'nativity' status ('Flora Europaea' or 'ITIS'), and 'Birdlife' International.

Functions in traits

Name Description
birdlife_habitat Get bird habitat information from BirdLife/IUCN
traitbank Search for traits from EOL's Traitbank.
leda Access LEDA trait data
ncbi_searcher Search for gene sequences available for taxa from NCBI.
ncbi_byname Retrieve gene sequences from NCBI by taxon name and gene names.
is_native Check if a species is native somewhere
traits-package Species trait data from around the web
eol_invasive_ Search for presence of taxonomic names in EOL invasive species databases.
betydb Search for traits from BETYdb
fe_native Check species status (native, exotic, ...) for one species from Flora Europaea webpage
birdlife_threats Get bird threat information from BirdLife/IUCN
ncbi_byid Retrieve gene sequences from NCBI by accession number.
plantatt PLANTATT plant traits dataset
coral Search for coral data on coraltraits.org
g_invasive Check invasive species status for a set of species from GISD database
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License MIT + file LICENSE
URL https://github.com/ropensci/traits
BugReports http://www.github.com/ropensci/traits/issues
LazyData true
VignetteBuilder knitr
NeedsCompilation no
Packaged 2015-06-11 21:05:56 UTC; sacmac
Repository CRAN
Date/Publication 2015-06-12 08:00:36

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