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trajeR (version 1.0)

plotrajeR.Trajectory.LOGIT: Plot Method for LOGIT Trajectory Objects

Description

Plots the trajectories for a Logistic model fitted by `trajeR`.

Usage

# S3 method for Trajectory.LOGIT
plotrajeR(
  Obj,
  plotcov = NULL,
  dec = 0,
  col = "black",
  Y = NULL,
  A = NULL,
  Risk = NULL,
  mean = FALSE,
  alpha = 1,
  ...
)

Value

a graphic.

Arguments

Obj

An object of class `Trajectory.LOGIT`.

plotcov

An optional vector or matrix of time-dependent covariates.

dec

A numeric value controlling the amount of jitter applied to data points for better visualization.

col

An optional vector of colors for individual points and mean trajectories.

Y

The original response variable matrix. If provided, individual data points are jittered and plotted.

A

The original time variable matrix.

Risk

Optional. The original risk covariate matrix.

mean

Logical. If `TRUE`, plots the mean of the observed data for each group.

alpha

A numeric value for the transparency of individual trajectory lines.

...

Other graphical parameters passed to `plot`.