combine_plot_and_tree

A plot of data about the leaves with the x axis
corresponding to leaves.

plot

tree.plot

The relative amount of space in the plot the tree
should take up.

tree.height

If true, the function will print the combined plot to
a graphics device, otherwise it will just return the gtable object
without printing.

print

This method takes a ggplot of some data along the tips of the tree
and a ggplot of a tree and combines them. It assumes that you are
putting the tree on top and that the x axis for the plot has the
leaves in the correct position (this can be found using the
function <code><a rd-options="" href="/link/get_leaf_position?package=treeDA&version=0.0.5" data-mini-rdoc="treeDA::get_leaf_position">get_leaf_position</a></code>).

Performs sparse discriminant analysis on a combination of
node and leaf predictors when the predictor variables are
structured according to a tree, as described in Fukuyama et
al. (2017) <doi:10.1371/journal.pcbi.1005706>.

Julia Fukuyama

treeDA

Tree-Based Discriminant Analysis

combine_plot_and_tree function

This method takes a ggplot of some data along the tips of the tree
and a ggplot of a tree and combines them. It assumes that you are
putting the tree on top and that the x axis for the plot has the
leaves in the correct position (this can be found using the
function <code><a rd-options='' href='get_leaf_position'>get_leaf_position</a></code>).

combine_plot_and_tree: Method for combining two ggplots

Description

Usage

Arguments

Value