⚠️There's a newer version (1.10.18) of this package.Take me there.

treescape (version 1.8.15)

Statistical Exploration of Landscapes of Phylogenetic Trees

Description

Tools for the exploration of distributions of phylogenetic trees. This package includes a shiny interface which can be started from R using 'treescapeServer()'.

Copy Link

Version

Install

install.packages('treescape')

Monthly Downloads

Version

1.8.15

License

GPL (>= 2)

Maintainer

Michelle Kendall

Last Published

November 2nd, 2015

Functions in treescape (1.8.15)

findGroves

Identify clusters of similar trees

treeVec

Tree vector function

medTree

Geometric median tree function

multiDist

Metric function for multiPhylo input

plotGroves

Scatterplot of groups of trees

treeDist

Metric function

treescapeServer

Web-based tree explorer

treescape

Phylogenetic tree exploration

woodmiceTrees

Bootstrap trees from woodmouse dataset

linearMrca

Linear MRCA function