calc_brts_stats

this function applies all tree statistics based on
branching times to a single tree (more or less ignoring topology), being:<ul>
<li>gamma</li>
<li>pigot's rho</li>
<li>mean branch length</li>
<li>nLTT with empty tree</li>
<li>treeness</li>
<li>var branch length</li>
<li>mean internal branch length</li>
<li>mean external branch length</li>
<li>var internal branch length</li>
<li>var external branch length</li>
</ul>

Collection of phylogenetic tree statistics,
collected throughout the literature. All functions have been
written to maximize computation speed. The package includes
umbrella functions to calculate all statistics, all balance
associated statistics, or all branching time related statistics.
Furthermore, the 'treestats' package supports summary statistic
calculations on Ltables, provides speed-improved coding of
branching times, Ltable conversion and includes algorithms to
create intermediately balanced trees. Full description can be
found in Janzen (2024) <doi:10.1016/j.ympev.2024.108168>.

Thijs Janzen

treestats

Phylogenetic Tree Statistics

calc_brts_stats function

<dl><dt>phylo</dt>
<dd>phylo object</dd></dl>

Arguments

Apply all tree statistics related to branching times to a single tree. — calc_brts_stats

<dl>

<dt>phylo</dt>
<dd>phylo object</dd>

</dl>

calc_brts_stats: Apply all tree statistics related to branching times to a single tree.

Description

Usage

Value

Arguments