Testing of SNPs and SNP Interactions in Case-Parent Trio Studies
Description
Testing SNPs and SNP interactions with a genotypic TDT. This package
furthermore contains functions for computing pairwise values of LD measures and
for identifying LD blocks, as well as functions for setting up matched
case pseudo-control genotype data for case-parent trios in order to run
trio logic regression, for imputing missing genotypes in trios, for simulating
case-parent trios with disease risk dependent on SNP interaction, and for
power and sample size calculation in trio data.