The functions run_simulation_ubiquity, simulate_subjects, or run_simulation_titrate
provide outputs in a more structured format, but it may be useful to
convert this "wide" format to a tall/skinny format.
som_to_df(cfg, som)Data frame of the format:
When applied to the output of run_simulation_ubiquity or run_simulation_titrate
ts.time - timescale of the system
ts.ts1, ... ts.tsn - timescales defined in the system (<TS>)
pred - predicted/simulated response
tt.ti1.x - titration event information (*)
name - state or output (<O>) name corresponding to the prediction
When applied to the output of simulate_subjects
ID - subject ID
ts.time - timescale of the system
ts.ts1, ... ts.tsn - timescales defined in the system (<TS>)
pred - predicted/simulated response
tt.ti1.x - titration event information (*)
P1, P2, ... Pn - system parameters for the subject (<P>)
name - state or output (<O>) name corresponding to the prediction
(* - field present when titration is enabled)
ubiquity system object
simulation output from run_simulation_ubiquity, simulate_subjects, or run_simulation_titrate
run_simulation_titrate internally when running simulations.