ufs v0.3.2
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Quantitative Analysis Made Accessible
This is a new version of the 'userfriendlyscience' package,
which has grown a bit unwieldy. Therefore, distinct functionalities
are being 'consciously uncoupled' into different packages. This package
contains the general-purpose tools and utilities (see the
'behaviorchange' package, the 'rosetta' package, and the
soon-to-be-released 'scd' package for other functionality), and
is the most direct 'successor' of the original 'userfriendlyscience' package.
For example, this package contains a number of basic functions to create
higher level plots, such as diamond plots, to easily plot sampling
distributions, to generate confidence intervals, to plan study sample sizes
for confidence intervals, and to do some basic operations such as
(dis)attenuate effect size estimates.
Readme
ufs
Functions in ufs
| Name | Description | |
| arr | Absolute Relative Risk and confidence interval | |
| computeStatistic_t | associationMatrix Helper Functions | |
| %IN% | Case insensitive version of %in% | |
| A_VarghaDelaney | Vargha & Delaney's A | |
| aiperjmv | Sample size for accuracy: r | |
| aipedjmv | Sample size for accuracy: d | |
| associationsDiamondPlot | A diamondplot with confidence intervals for associations | |
| areColors | Check whether elements of a vector are valid colors | |
| associationMatrix | associationMatrix | |
| carelessReport | A report to help diagnosing careless responders | |
| CIM | Conceptual Independence Matrix | |
| diamondCoordinates | Basic ggplot2 diamond plot layer construction functions | |
| bfi-data | 25 Personality items representing 5 factors | |
| cohensdCI | The distribution of Cohen's d | |
| checkPkgs | Check for presence of a package | |
| biAxisDiamondPlot | Diamondplot with two Y axes | |
| convertToNumeric | Conveniently convert vectors to numeric | |
| carelessObject | Compute diagnostics for careless responding | |
| cramersV | Cramer's V and its confidence interval | |
| fa_failsafe | Do factor-analysis, logging warnings and errors | |
| attenuate.d | Attenuate a Cohen's d estimate for unreliability in the continuous variable | |
| confIntOmegaSq | Confidence intervals for Omega Squared | |
| factorLoadingDiamondCIplot | Two-dimensional visualisation of factor analyses | |
| duoComparisonDiamondPlot | meansComparisonDiamondPlot and duoComparisonDiamondPlot | |
| attenuate.r | Attenuate a Pearson's r estimate for unreliability in the measurements | |
| extractVarName | Extract variable names | |
| confintrjmv | Effect Size Confidence Interval: Pearson's r | |
| confintdjmv | Effect Size Confidence Interval: Cohens's d | |
| confIntProp | Confidence intervals for proportions, vectorized over all arguments | |
| ggEasyBar | Convenience functions for ggplots based on multiple variables | |
| ggBoxplot | Box plot using ggplot | |
| cat0 | Concatenate to screen without spaces | |
| convert.d.to.U3 | Convert Cohen's d to U3 | |
| disattenuate.d | Disattenuate a Cohen's d estimate for unreliability in the continuous variable | |
| convert | conversion functions | |
| knitAndSave | knitAndSave | |
| exportToHTML | Exporting tables to HTML | |
| knitFig | Easily knit a custom figure fragment | |
| escapeRegex | Escapes any characters that would have special meaning in a reqular expression. | |
| ggSave | Save a ggplot with specific defaults | |
| ggProportionPlot | Sample distribution based plotting of proportions | |
| disattenuate.r | Disattentuate a Pearson's r estimate for unreliability | |
| ggBarChart | Bar chart using ggplot | |
| formatPvalue | Pretty formatting of p values | |
| formatR | Pretty formatting of correlation coefficients | |
| getData | Basic SPSS translation functions | |
| ifelseObj | Conditional returning of an object | |
| ggqq | Easy ggplot Q-Q plot | |
| meanConfInt | A confidence interval for the mean | |
| irpplot | Visualising individual response patterns | |
| is.nr | NULL and NA 'proof' checking of whether something is a number | |
| diamondPlot | Basic diamond plot construction function | |
| confIntR | A function to compute a correlation's confidence interval | |
| iqrOutlier | Identify outliers according to the IQR criterion | |
| descr | descr (or descriptives) | |
| isTrue | More flexible version of isTRUE | |
| multiResponse | Generate a table for multiple response questions | |
| meanSDtoDiamondPlot | A diamond plot based on means, standard deviations, and sample sizes | |
| repeatStr | Repeat a string a number of times | |
| findShortestInterval | Find the shortest interval | |
| multiVarFreq | Generate a table collapsing frequencies of multiple variables | |
| noZero | Remove one or more zeroes before the decimal point | |
| faConfInt | Extract confidence bounds from psych's factor analysis object | |
| formatCI | Pretty formatting of confidence intervals | |
| multiResponsejmv | Multi Response | |
| convert.cer.to.d | Helper functions for Numbers Needed for Change | |
| opts | Options for the ufs package | |
| biDimColors | Create colours for a response scale for an item | |
| dataShape | normalityAssessment and samplingDistribution | |
| makeScales | Title | |
| zotero_nr_of_items | Get number of items in a public Zotero group | |
| report | Output report from results | |
| sharedSubString | sharedSubString | |
| pwr.bootES | Estimate required sample size for accuracy in parameter estimation using bootES | |
| setFigCapNumbering | Set caption numbering | |
| suspectParticipants | Selects suspect participants from a carelessObject | |
| strToFilename | Convert a string to a safe filename | |
| spearmanBrown | Spearman-Brown formula | |
| testRetestSimData | testRetestSimData is a simulated dataframe used to demonstrate the testRetestAlpha coefficient function. | |
| pomegaSq | The distribution of Omega Squared | |
| vecTxt | Easily parse a vector into a character value | |
| zotero_construct_export_call | Construct the URL for a Zotero export call | |
| normalHist | normalHist | |
| meansDiamondPlot | Diamond plots | |
| qVec | Convenience function to quickly copy-paste a vector | |
| is.odd | Checking whether numbers are odd or even | |
| regrInfluential | Detecting influential cases in regression analyses | |
| meansDiamondPlotjmv | Diamond plot: means | |
| safeRequire | Load a package, install if not available | |
| pwr.confIntProp | Estimate required sample size for accuracy in parameter estimation of a proportion | |
| massConvertToNumeric | Converting many dataframe columns to numeric | |
| scaleDiagnosis | scaleDiagnosis | |
| pwr.confIntR | Determine required sample size for a given confidence interval width for Pearson's r | |
| scaleStructure | scaleStructure | |
| scatterMatrix | scatterMatrix | |
| zotero_get_all_items | Get all items in a public Zotero group | |
| zotero_download_and_export_items | Download and save all items in a public Zotero group | |
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Details
| suggests | bootES (>= 1.2) , car (>= 3.0) , careless (>= 1.1) , jmvcore (>= 1.2) , lavaan (>= 0.6) , MBESS (>= 4.5.1) , psych (>= 1.8) , rio (>= 0.5) , rmarkdown , rstudioapi |
| imports | digest (>= 0.6.19) , diptest (>= 0.75.7) , dplyr (>= 0.7.6) , GGally (>= 1.4.0) , ggplot2 (>= 2.2.1) , ggrepel (>= 0.8) , ggridges (>= 0.5.0) , grDevices (>= 3.0.0) , gridExtra (>= 2.3) , gtable (>= 0.2.0) , htmltools (>= 0.4.0) , knitr (>= 1.22) , pander (>= 0.6.3) , plyr (>= 1.8.4) , scales (>= 1.0.0) , SuppDists (>= 1.1.9) , viridis (>= 0.5.1) |
| depends | R (>= 3.0.0) |
| Contributors | Stefan Gruijters |
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