ukb_gen_meta

A UKB dataset created with <code><a rd-options="" href="/link/ukb_df?package=ukbtools&version=0.11.1" data-mini-rdoc="ukbtools::ukb_df">ukb_df</a></code>.

data

Defunct. See help("ukb_defunct").
UKB have published <a href="http://www.ukbiobank.ac.uk/wp-content/uploads/2014/04/UKBiobank_genotyping_QC_documentation-web.pdf">full details of genotyping and quality control</a> for the interim genotype data. This function retrieves UKB assessment centre codes and assessment centre names, genetic ethnic grouping, genetically-determined sex, missingness, UKB recommended genomic analysis exclusions, BiLeve unrelatedness indicator, and BiLeve Affymetrix and genotype quality control.

A set of tools to create a UK Biobank <http://www.ukbiobank.ac.uk/> dataset from a UKB fileset (.tab, .r, .html),
visualize primary demographic data for a sample subset, query ICD diagnoses,
retrieve genetic metadata, read and write standard file formats for genetic analyses.

Ken Hanscombe

ukbtools

Manipulate and Explore UK Biobank Data

ukb_gen_meta function

A UKB dataset created with <code><a rd-options='' href='ukb_df'>ukb_df</a></code>.

Defunct. See help("ukb_defunct").
UKB have published <a href='http://www.ukbiobank.ac.uk/wp-content/uploads/2014/04/UKBiobank_genotyping_QC_documentation-web.pdf'>full details of genotyping and quality control</a> for the interim genotype data. This function retrieves UKB assessment centre codes and assessment centre names, genetic ethnic grouping, genetically-determined sex, missingness, UKB recommended genomic analysis exclusions, BiLeve unrelatedness indicator, and BiLeve Affymetrix and genotype quality control.

ukb_gen_meta: Genetic metadata

Description

Usage

Arguments