ukb_gen_rel

A UKB dataset created with <code><a rd-options="" href="/link/ukb_df?package=ukbtools&version=0.11.3" data-mini-rdoc="ukbtools::ukb_df">ukb_df</a></code>.

data

Defunct. See help("ukb_defunct").
Makes a data.frame containing all related individuals with columns UKB ID, pair ID, <a href="http://people.virginia.edu/~wc9c/KING/manual.html">KING kinship coefficient</a>, and proportion of alleles IBS = 0. UKB have published <a href="http://www.ukbiobank.ac.uk/wp-content/uploads/2014/04/UKBiobank_genotyping_QC_documentation-web.pdf">full details of genotyping and quality control</a> including details on relatedness calculations for the interim genotype data.

A set of tools to create a UK Biobank <http://www.ukbiobank.ac.uk/> dataset from a UKB fileset (.tab, .r, .html),
visualize primary demographic data for a sample subset, query ICD diagnoses,
retrieve genetic metadata, read and write standard file formats for genetic analyses.

Ken Hanscombe

ukbtools

Manipulate and Explore UK Biobank Data

ukb_gen_rel function

A UKB dataset created with <code><a rd-options='' href='ukb_df'>ukb_df</a></code>.

Defunct. See help("ukb_defunct").
Makes a data.frame containing all related individuals with columns UKB ID, pair ID, <a href='http://people.virginia.edu/~wc9c/KING/manual.html'>KING kinship coefficient</a>, and proportion of alleles IBS = 0. UKB have published <a href='http://www.ukbiobank.ac.uk/wp-content/uploads/2014/04/UKBiobank_genotyping_QC_documentation-web.pdf'>full details of genotyping and quality control</a> including details on relatedness calculations for the interim genotype data.

ukb_gen_rel: Creates a table of related individuals

Description

Usage

Arguments

See Also