Learn R Programming

unifiedWMWqPCR (version 1.8.0)

Unified Wilcoxon-Mann Whitney Test for testing differential expression in qPCR data

Description

This packages implements the unified Wilcoxon-Mann-Whitney Test for qPCR data. This modified test allows for testing differential expression in qPCR data.

Copy Link

Version

Version

1.8.0

License

GPL (>=2)

Maintainer

Joris Meys

Last Published

February 15th, 2017

Functions in unifiedWMWqPCR (1.8.0)

volcanopar

Parameters used for the function volcanoplot
getEstimate

Extract logor, or, odds and percentages from a uwmwRes object
plot,uwmwRes,ANY-method

Quick forest plot of significantly up- and downregulated features.
uwmwRes-class

Class uwmwRes
forestplot

Making a forest plot of the results of uWMW
uWMW,matrix-method

The unified Wilcoxon-Mann-Whitney test for qPCR data
NBdata

Documentation for the dataset NBdata
as.matrix.uwmwEstimate

S3 method as.matrix for uwmwEstimate objects.
sort.uwmwRes

Sort and order method for uWMWRes objects
uwmw_Accessors

Extract info from uwmwRes and uwmwEstimate objects
uwmwEstimate-class

The class uwmwEstimate
unifiedWMWqPCR-package

Unified Wilcoxon-Mann Whitney Test for qPCR data.
volcanoplot

Make a volcano plot of the outcome of a uWMW test
as.matrix.uwmwRes

S3 method as.matrix for uwmwRes objects.
uwmw_Extract

Extract data from uwmwRes and uwmwEstimate objects.