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utr.annotation (version 1.0.4)

checkInputValid: Check if the variable table is a valid for UTR annotation

Description

Check whether has 4 required columns, remove rows have NAs in the required columns, split rows if there're collapsed columns (items are separated by ,)

Usage

checkInputValid(variantsTable, sep = ",")

Arguments

variantsTable

A data.table containing all variants

sep

Delimiter used in variant file for concatenating multiple items in one column

Value

A data.table containing all valid variants