getTranscriptIds

variantsTable

species

ensemblVersion

<p>path to store database information</p>

dataDir

<p><code>getTranscriptIds</code> Get transcript ids that overlap with each variant in the variant table</p>

internal

A fast, user-friendly tool for annotating potential deleterious variants in the untranslated regions for both human and mouse species. Y Liu, JD Dougherty (2021) <doi:10.1101/2021.06.23.449510>.

Yating Liu

utr.annotation

Annotate Variants in the Untranslated Regions

Joseph D. Dougherty

getTranscriptIds function

Get protein coding transcript ids that overlap with each variant in the variant table — getTranscriptIds

Get protein coding transcript ids that overlap with each variant in the variant table

getTranscriptIds: Get protein coding transcript ids that overlap with each variant in the variant table

Description

Usage

Arguments

Value