getTrasncriptsRegions

transcriptIds

species

ensemblVersion

dataDir

<p><code>getTrasncriptsRegions</code> query "ensembl_gene_id", "ensembl_transcript_id", "transcript_start", "transcript_end", "5_utr_start", "5_utr_end", "3_utr_start", "3_utr_end", "genomic_coding_start", "genomic_coding_end", "gene_biotype", "strand" from Ensembl database</p>

internal

A fast, user-friendly tool for annotating potential deleterious variants in the untranslated regions for both human and mouse species. Y Liu, JD Dougherty (2021) <doi:10.1101/2021.06.23.449510>.

Yating Liu

utr.annotation

Annotate Variants in the Untranslated Regions

Joseph D. Dougherty

getTrasncriptsRegions function

Get information on transcript regions, UTRs regions, coding regions, chromosome name, and strand from Ensembl database — getTrasncriptsRegions

Get information on transcript regions, UTRs regions, coding regions, chromosome name, and strand from Ensembl database

getTrasncriptsRegions: Get information on transcript regions, UTRs regions, coding regions, chromosome name, and strand from Ensembl database

Description

Usage

Arguments

Value