extract_from_GISAID

This function get the metadata from each header of GISAID fasta file

To ease the visualization of outputs from Diversity Motif Analyser ('DiMA';
<https://github.com/BVU-BILSAB/DiMA>). 'vDiveR' allows visualization of the diversity
motifs (index and its variants – major, minor and unique) for elucidation of
the underlying inherent dynamics. Please refer <https://vdiver-manual.readthedocs.io/en/latest/>
for more information.

Pendy Tok

vDiveR

Visualization of Viral Protein Sequence Diversity Dynamics

Li Chuin Chong

Evgenia Chikina

Yin Cheng Chen

Mohammad Asif Khan

extract_from_GISAID function

<dl><dt>file_path</dt>
<dd>path of fasta file</dd></dl>

Arguments

Extract metadata via fasta file from GISAID — extract_from_GISAID

<dl>

<dt>file_path</dt>
<dd>path of fasta file</dd>

</dl>

extract_from_GISAID: Extract metadata via fasta file from GISAID

Description

Usage

Arguments