valr (version 0.5.0)

interval_spacing: Calculate interval spacing.

Description

Spacing for the first interval of each chromosome is undefined (NA). The leading interval of an overlapping interval pair has a negative value.

Usage

interval_spacing(x)

Arguments

x

tbl_interval()

Value

tbl_interval() with .spacing column.

See Also

Other utilities: bed12_to_exons, bed_makewindows, bound_intervals, flip_strands

Examples

# NOT RUN {
x <- trbl_interval(
  ~chrom, ~start, ~end,
  'chr1', 1,      100,
  'chr1', 150,    200,
  'chr2', 200,    300
)

interval_spacing(x)

# }