Absolute distances are scaled by the inter-reference gap for the
chromosome as follows. For Q
query points and R
reference
points on a chromosome, scale the distance for each query point i
to
the closest reference point by the inter-reference gap for each chromosome.
If an x
interval has no matching y
chromosome,
.absdist
is NA
.
$$d_i(x,y) = min_k(|q_i - r_k|)\frac{R}{Length\ of\ chromosome}$$
Both absolute and scaled distances are reported as .absdist
and
.absdist_scaled
.
Interval statistics can be used in combination with
dplyr::group_by()
and dplyr::do()
to calculate
statistics for subsets of data. See vignette('interval-stats')
for
examples.