get.base.substitution

<p>Get base substitution represented by pyrimidine in base pair. 
If more than one base in REF/ALT (i.e. MNV or indel rather than SNV), NA will be returned</p>

Multi-caller variant analysis pipeline for targeted analysis sequencing (TAS) data. Features a modular, automated workflow that can start with raw reads and produces a user-friendly PDF summary and a spreadsheet containing consensus variant information.

Adam Mills

varitas

Variant Calling in Targeted Analysis Sequencing Data

Erle Holgersen

Ros Cutts

Syed Haider

get.base.substitution function

Get base substitution — get.base.substitution

Get base substitution

get.base.substitution: Get base substitution

Description

Usage

Arguments

Value