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varitas (version 0.0.2)

get.miniseq.sample.files: get.miniseq.sample.files

Description

Get files for a sample in a directory, ensuring there's only a single match per sample ID.

Usage

get.miniseq.sample.files(sample.ids, directory,
  file.suffix = "_S\\d{1,2}_.*")

Arguments

sample.ids

Vector of sample ids. Should form first part of file name

directory

Directory where files can be found

file.suffix

Regex expression for end of file name. For example, `file.suffix = '_S\d1,2_.*_R1_.*'` will match R1 files.1 files.

Value

Character vector of file paths