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vbdm (version 0.0.4)

Variational Bayes Discrete Mixture Model

Description

Efficient algorithm for solving discrete mixture regression model for rare variant association analysis. Uses variational Bayes algorithm to efficiently search over model space. Outputs an approximate likelihood ratio test as well as variant level posterior probabilities of association.

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Version

Install

install.packages('vbdm')

Monthly Downloads

7

Version

0.0.4

License

GPL-2

Maintainer

Benjamin Logsdon

Last Published

February 1st, 2014

Functions in vbdm (0.0.4)

burdenPlot

plotting function for rare variant vbdm test
vbdm

fit a discrete mixture model
vbdmR

fit a discrete mixture model (R implementation)