vcfpp_calc_info_persite

Calculate INFO score from GP after genotype imputation

The 'vcfpp.h' (<https://github.com/Zilong-Li/vcfpp>) provides an easy-to-use 'C++' 'API' of 'htslib', offering full functionality for manipulating Variant Call Format (VCF) files. The 'vcfppR' package serves as the R bindings of the 'vcfpp.h' library, enabling rapid processing of both compressed and uncompressed VCF files. Explore a range of powerful features for efficient VCF data manipulation.

Zilong Li

vcfppR

Rapid Manipulation of the Variant Call Format (VCF)

vcfpp_calc_info_persite function

<dl><dt>GP</dt>
<dd>vector of length a multiple of 3</dd></dl>

Arguments

Calculate INFO score from GP after genotype imputation — vcfpp_calc_info_persite

<dl>

<dt>GP</dt>
<dd>vector of length a multiple of 3</dd>

</dl>

vcfpp_calc_info_persite: Calculate INFO score from GP after genotype imputation

Description

Usage

Arguments